PATLib – Differential Expression Database
Molecular Work:
| Table 2.2.2.1a: Characteristics of the Experiment of Library Construction In Potato (2 RUNs) | |||||
| Samples | GT/Treatment | index i5 | index i7 | Reads | |
| 1 | Soprano control | SA502 ACTATCTG | SA705 CGTACTCA | 962682 | |
| 2 | Soprano drought | SA502 ACTATCTG | SA706 CTACGCAG | 1225028 | |
| 3 | Soprano cold | SA502 ACTATCTG | SA707 GGAGACTA | 1235267 | |
| 4 | Soprano hot | SA502 ACTATCTG | SA708 GTCGCTCG | 640208 | |
| 5 | Kondor control | SA502 ACTATCTG | SA709 GTCGTAGT | 1118145 | |
| 6 | Kondor drought | SA502 ACTATCTG | SA710 TAGCAGAC | 1437434 | |
| 7 | Kondor cold | SA502 ACTATCTG | SA711 TCATAGAC | 1057713 | |
| 8 | Kondor hot | SA502 ACTATCTG | SA712 TCGCTATA | 799741 | |
| Total: | 8,476,218 | ||||
- I5/I7 = Illumina Indexes
Fig. 2.1: Scheme for producing barcoded amplicons from restriction fragments (RF) in Library Construction